ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: aprataxin and PNKP like factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303795 APLF-001 ENSG00000169621 9606 + 2:68467561-68580162 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000303795
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000303795 0.460±0.10 0.256±0.25 0.368±0.00 1.043±0.00 0.409±0.27

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000012 IMP single strand break repair
GO:0000166 IDA nucleotide binding
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003906 IDA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0004520 IDA endodeoxyribonuclease activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006302 IMP double-strand break repair
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008408 IDA 3'-5' exonuclease activity
GO:0035861 IDA site of double-strand break
GO:0045191 IEA regulation of isotype switching
GO:0046872 IEA metal ion binding
GO:0051106 IGI positive regulation of DNA ligation
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032130 Aplf-201 protein_coding Mus_musculus 0 608
ENSMUST00000065997 Aplf-202 protein_coding Mus_musculus 0 532

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