| Transcript ID | BECs | HAoEC | HUVEC |
|---|---|---|---|
| ENST00000310092 | 45.465±0.00 | 30.496±7.20 | 49.678±25.25 |
Transcript Info |
||||||
| Description: | RNA binding motif protein 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
|
ENST00000310092 |
RBM4-001 |
ENSG00000173933 |
9606 | + |
11:66638617-66646469 |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000381 | IDA | regulation of alternative mRNA splicing, via spliceosome |
| GO:0002190 | IDA | cap-independent translational initiation |
| GO:0002192 | IDA | IRES-dependent translational initiation |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | IDA | RNA binding |
| GO:0003729 | IDA | mRNA binding |
| GO:0003730 | ISS | mRNA 3'-UTR binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005654 | IDA | nucleoplasm |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
| GO:0006396 | TAS | RNA processing |
| GO:0006397 | IEA | mRNA processing |
| GO:0008270 | IEA | zinc ion binding |
| GO:0008380 | IEA | RNA splicing |
| GO:0010494 | IDA | cytoplasmic stress granule |
| GO:0016607 | IDA | nuclear speck |
| GO:0017148 | IDA | negative regulation of translation |
| GO:0030154 | IEA | cell differentiation |
| GO:0032055 | IDA | negative regulation of translation in response to stress |
| GO:0035198 | IDA | miRNA binding |
| GO:0035278 | IDA | negative regulation of translation involved in gene silencing by miRNA |
| GO:0043153 | ISS | entrainment of circadian clock by photoperiod |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0045947 | IDA | negative regulation of translational initiation |
| GO:0046685 | IDA | response to arsenic-containing substance |
| GO:0046822 | IDA | regulation of nucleocytoplasmic transport |
| GO:0051149 | IDA | positive regulation of muscle cell differentiation |
| GO:0051403 | IDA | stress-activated MAPK cascade |
| GO:0097157 | IDA | pre-mRNA intronic binding |
| GO:0097158 | IDA | pre-mRNA intronic pyrimidine-rich binding |
| GO:0097167 | ISS | circadian regulation of translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000180248
|
Rbm4-001 | protein_coding | Mus_musculus | 0 | 1949 |
|
ENSMUST00000172000
|
Gm21992-001 | protein_coding | Mus_musculus | 0 | 1594 |
|
ENSMUST00000179909
|
Gm21992-002 | protein_coding | Mus_musculus | 0 | 1369 |
|
ENSMUST00000179189
|
Rbm4-004 | protein_coding | Mus_musculus | 0 | 1077 |
|
ENSMUST00000036744
|
Rbm4b-001 | protein_coding | Mus_musculus | 0 | 1020 |
|
ENSMUST00000182821
|
Rbm4b-004 | retained_intron | Mus_musculus | 0 | 1018 |
|
ENSMUST00000164376
|
Rbm4-005 | protein_coding | Mus_musculus | 0 | 800 |
|
ENSMUST00000164209
|
Rbm4-006 | protein_coding | Mus_musculus | 0 | 675 |
|
ENSMUST00000183008
|
Rbm4b-005 | processed_transcript | Mus_musculus | 0 | 614 |
|
ENSMUST00000182200
|
Rbm4b-002 | nonsense_mediated_decay | Mus_musculus | 0 | 610 |
|
ENSMUST00000182065
|
Rbm4b-003 | retained_intron | Mus_musculus | 0 | 610 |
|
ENSMUST00000178727
|
Gm21992-003 | retained_intron | Mus_musculus | 0 | 588 |
|
ENSMUST00000179820
|
Rbm4-003 | retained_intron | Mus_musculus | 0 | 588 |
|
ENSMUST00000178615
|
Rbm4-002 | protein_coding | Mus_musculus | 0 | 588 |
|
ENSMUST00000183332
|
Rbm4b-007 | retained_intron | Mus_musculus | 0 | 420 |
|
ENSMUST00000178404
|
Gm21992-005 | protein_coding | Mus_musculus | 0 | 346 |
|
ENSMUST00000177776
|
Gm21992-006 | processed_transcript | Mus_musculus | 0 | 276 |
|
ENSMUST00000178353
|
Gm21992-004 | nonsense_mediated_decay | Mus_musculus | 1e-29 | 135 |