ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: chromatin assembly factor 1, subunit B (p60)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314103 CHAF1B-001 ENSG00000159259 9606 + 21:36385378-36419015 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000314103
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000314103 1.500±0.00 4.387±1.31 1.270±0.00 2.810±0.00 2.515±1.10

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0003682 TAS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 NAS cytoplasm
GO:0005829 IDA cytosol
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006461 TAS protein complex assembly
GO:0007049 IEA cell cycle
GO:0031497 IDA chromatin assembly
GO:0033186 IDA CAF-1 complex
GO:0042393 NAS histone binding
GO:0043234 IDA protein complex
GO:0051082 TAS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117099 Chaf1b-003 protein_coding Mus_musculus 0 1395
ENSMUST00000023666 Chaf1b-001 protein_coding Mus_musculus 0 1395
ENSMUST00000124313 Chaf1b-002 retained_intron Mus_musculus 0 771
ENSMUST00000152980 Chaf1b-008 processed_transcript Mus_musculus 0 412
ENSMUST00000143006 Chaf1b-006 retained_intron Mus_musculus 8e-20 104
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.00002 57

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