ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: corepressor interacting with RBPJ, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342016 CIR1-001 ENSG00000138433 9606 - 2:174348022-174395715 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000342016
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000342016 3.207±0.00 3.588±2.00 4.917±0.00 8.593±0.00 6.037±3.58

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0003676 IEA nucleic acid binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003705 TAS RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058615 Cir1-001 protein_coding Mus_musculus 0 1013
ENSMUST00000117547 Gm13803-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000118681 Gm2810-001 processed_pseudogene Mus_musculus 0 641
ENSDART00000156280 si:ch211-195b15.7-001 protein_coding Danio_rerio 0.0002 53
ENSDART00000154950 si:ch211-195b15.7-002 retained_intron Danio_rerio 0.00006 53
ENSDART00000022660 si:ch211-195b15.7-201 protein_coding Danio_rerio 0.0002 53

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