ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: macrophage scavenger receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381998 MSR1-003 ENSG00000038945 9606 - 8:16139319-16192659 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHUVECENST00000381998
Transcript ID HAoEC HHSEC HUVEC
ENST00000381998 0.043±0.01 1.953±0.00 0.048±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005044 IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005581 IEA collagen trimer
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006898 IEA receptor-mediated endocytosis
GO:0007165 IEA signal transduction
GO:0010744 ISS positive regulation of macrophage derived foam cell differentiation
GO:0010886 ISS positive regulation of cholesterol storage
GO:0016020 IEA membrane
GO:0030169 ISS low-density lipoprotein particle binding
GO:0030301 ISS cholesterol transport
GO:0030666 TAS endocytic vesicle membrane
GO:0034362 IEA low-density lipoprotein particle
GO:0034381 ISS plasma lipoprotein particle clearance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140494 Hspa14-003 nonsense_mediated_decay Mus_musculus 0.0000003 62
ENSMUST00000124331 Hspa14-002 nonsense_mediated_decay Mus_musculus 0.0000003 62
ENSMUST00000113827 Brwd1-003 protein_coding Mus_musculus 0.00001 57
ENSMUST00000134412 Serf2-002 retained_intron Mus_musculus 0.0002 53
ENSMUST00000139253 Serf2-001 protein_coding Mus_musculus 0.0002 53
ENSMUST00000004428 Clcn5-001 protein_coding Mus_musculus 0.0002 53

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