ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: solute carrier family 8 (sodium/calcium exchanger), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407929 SLC8A1-011 ENSG00000183023 9606 - 2:40114731-40430271 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000407929
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000407929 0.289±0.15 0.156±0.00 0.086±0.08

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163123 Slc8a1-202 protein_coding Mus_musculus 0 2320
ENSMUST00000163680 Slc8a1-203 protein_coding Mus_musculus 0 2320
ENSMUST00000086538 Slc8a1-201 protein_coding Mus_musculus 0 2318

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