ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: high mobility group box 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419110 HMGB3-002 ENSG00000029993 9606 + X:150980509-150987877 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000419110
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000419110 9.679±3.46 11.255±0.00 12.542±5.47

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 793
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 791
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 791
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 791
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 791
ENSMUST00000078030 Gm6104-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 654
ENSMUST00000195316 Gm8850-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000155930 Gm8813-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000162465 Hmgb3-ps-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000193850 Gm5979-001 unprocessed_pseudogene Mus_musculus 0 571
ENSMUST00000176139 Gm18367-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000117677 Gm13386-001 processed_pseudogene Mus_musculus 3e-31 139

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