ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: high mobility group box 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430118 HMGB3-004 ENSG00000029993 9606 + X:150985531-150987297 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHMVEC-DHUVECENST00000430118
Transcript ID BECs HMVEC-D HUVEC
ENST00000430118 14.671±0.00 12.524±0.00 10.290±2.37

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 651
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 649
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 649
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 649
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 647
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 641
ENSMUST00000078030 Gm6104-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000195316 Gm8850-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000155930 Gm8813-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000193850 Gm5979-001 unprocessed_pseudogene Mus_musculus 0 464
ENSMUST00000162465 Hmgb3-ps-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000176139 Gm18367-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000117677 Gm13386-001 processed_pseudogene Mus_musculus 2e-31 139

Loading