ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: sodium channel, voltage-gated, type XI, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444237 SCN11A-002 ENSG00000168356 9606 - 3:38849278-38950561 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000444237
Transcript ID HAoEC HUVEC
ENST00000444237 0.026±0.01 0.023±0.02

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005216 IEA ion channel activity
GO:0005248 IBA:IEA voltage-gated sodium channel activity
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006814 TAS:IEA sodium ion transport
GO:0008219 IEA cell death
GO:0016020 IEA membrane
GO:0019228 IBA neuronal action potential
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IBA sodium ion transmembrane transport
GO:0042493 TAS response to drug
GO:0051930 ISS regulation of sensory perception of pain
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070617 Scn11a-201 protein_coding Mus_musculus 0 1585
ENSMUST00000100067 Scn2a1-201 protein_coding Mus_musculus 0 281
ENSMUST00000028377 Scn2a1-001 protein_coding Mus_musculus 0 281
ENSMUST00000112371 Scn1a-201 protein_coding Mus_musculus 0 254
ENSMUST00000094951 Scn1a-005 protein_coding Mus_musculus 0 254
ENSMUST00000077489 Scn1a-004 protein_coding Mus_musculus 0 254
ENSMUST00000112366 Scn1a-001 protein_coding Mus_musculus 0 254
ENSMUST00000169900 Scn9a-203 protein_coding Mus_musculus 0 243
ENSMUST00000100063 Scn9a-201 protein_coding Mus_musculus 0 243
ENSMUST00000164384 Scn9a-202 protein_coding Mus_musculus 0 243
ENSMUST00000112354 Scn9a-002 protein_coding Mus_musculus 0 243
ENSMUST00000100064 Scn9a-001 protein_coding Mus_musculus 0 243
ENSMUST00000156865 Scn1a-003 protein_coding Mus_musculus 0 230

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