ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: sodium channel, voltage-gated, type IX, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454569 SCN9A-002 ENSG00000169432 9606 - 2:166281760-166306571 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HUVECENST00000454569
Transcript ID HUVEC
ENST00000454569 0.165±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005248 IBA voltage-gated sodium channel activity
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006814 TAS sodium ion transport
GO:0016020 IEA membrane
GO:0019228 IBA neuronal action potential
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IBA sodium ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169900 Scn9a-203 protein_coding Mus_musculus 0 1768
ENSMUST00000112354 Scn9a-002 protein_coding Mus_musculus 0 1663
ENSMUST00000164384 Scn9a-202 protein_coding Mus_musculus 0 1644
ENSMUST00000100064 Scn9a-001 protein_coding Mus_musculus 0 1644
ENSMUST00000100063 Scn9a-201 protein_coding Mus_musculus 0 1524
ENSMUST00000151234 Scn9a-004 retained_intron Mus_musculus 0 540
ENSMUST00000112371 Scn1a-201 protein_coding Mus_musculus 0 455
ENSMUST00000094951 Scn1a-005 protein_coding Mus_musculus 0 455
ENSMUST00000077489 Scn1a-004 protein_coding Mus_musculus 0 455
ENSMUST00000112366 Scn1a-001 protein_coding Mus_musculus 0 455
ENSMUST00000144254 Scn2a1-004 protein_coding Mus_musculus 0 435
ENSMUST00000066432 Scn3a-201 protein_coding Mus_musculus 0 403
ENSMUST00000100069 Scn3a-001 protein_coding Mus_musculus 0 403
ENSMUST00000108908 Scn8a-002 protein_coding Mus_musculus 0 320
ENSMUST00000108909 Scn8a-001 protein_coding Mus_musculus 0 320
ENSMUST00000108910 Scn8a-202 protein_coding Mus_musculus 0 320
ENSDART00000022042 scn8aa-001 protein_coding Danio_rerio 0 316
ENSMUST00000138368 Scn2a1-003 retained_intron Mus_musculus 0 289

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