ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: ribosomal protein L13a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467825 RPL13A-009 ENSG00000142541 9606 + 19:49487634-49491843 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHHSECHMVEC-DHUVECENST00000467825
Transcript ID BECs HHSEC HMVEC-D HUVEC
ENST00000467825 1590.365±248.29 423.423±0.00 935.718±0.00 706.018±96.50

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015934 IEA large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150350 Rpl13a-001 protein_coding Mus_musculus 0 652
ENSMUST00000124300 Rpl13a-011 protein_coding Mus_musculus 0 638
ENSMUST00000102669 Rpl13a-009 nonsense_mediated_decay Mus_musculus 0 588
ENSMUST00000117851 Gm11478-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000125074 Rpl13a-006 processed_transcript Mus_musculus 0 542
ENSMUST00000131697 Rpl13a-005 retained_intron Mus_musculus 0 337
ENSMUST00000142239 Rpl13a-010 processed_transcript Mus_musculus 0 329
ENSMUST00000141807 Rpl13a-002 processed_transcript Mus_musculus 0 327
ENSMUST00000138887 Rpl13a-007 retained_intron Mus_musculus 0 191
ENSMUST00000152970 Rpl13a-003 retained_intron Mus_musculus 5e-24 115

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