ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: survival of motor neuron 1, telomeric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514951 SMN1-002 ENSG00000172062 9606 + 5:70925056-70952567 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000514951
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000514951 0.374±0.00 0.834±0.23 4.175±0.00 1.249±0.00 0.760±0.38

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022147 Smn1-001 protein_coding Mus_musculus 0 327
ENSMUST00000134514 Smn1-002 retained_intron Mus_musculus 0 283
ENSMUST00000140745 Smn1-006 nonsense_mediated_decay Mus_musculus 0 235
ENSMUST00000125572 Smn1-007 retained_intron Mus_musculus 2.94273e-44 183
ENSMUST00000143937 Smn1-008 protein_coding Mus_musculus 2e-40 171
ENSDART00000127956 smn1-201 protein_coding Danio_rerio 1e-17 95
ENSDART00000028099 smn1-001 protein_coding Danio_rerio 1e-17 95

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