ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: nuclear factor related to kappaB binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524794 NFRKB-002 ENSG00000170322 9606 - 11:129864470-129893009 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000524794
Transcript ID HAoEC HUVEC
ENST00000524794 2.692±1.43 1.242±0.56

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IPI protease binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006954 TAS inflammatory response
GO:0031011 IEA:IDA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132329 Nfrkb-002 nonsense_mediated_decay Mus_musculus 0 4089
ENSMUST00000086167 Nfrkb-001 protein_coding Mus_musculus 0 4028
ENSMUST00000152593 Nfrkb-003 nonsense_mediated_decay Mus_musculus 0 3864
ENSMUST00000128375 Nfrkb-006 retained_intron Mus_musculus 0 2830
ENSMUST00000143558 Nfrkb-008 retained_intron Mus_musculus 0 416
ENSMUST00000134528 Nfrkb-005 retained_intron Mus_musculus 0 326

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