Transcript Info |
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| Description: | vimentin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
|
ENST00000544301 |
VIM-201 |
ENSG00000026025 |
9606 | + |
10:17228259-17237585 |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001948 | IPI | glycoprotein binding |
| GO:0003725 | IDA | double-stranded RNA binding |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005200 | IDA | structural constituent of cytoskeleton |
| GO:0005212 | IEA | structural constituent of eye lens |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005777 | IDA | peroxisome |
| GO:0005829 | IDA | cytosol |
| GO:0005856 | TAS | cytoskeleton |
| GO:0005882 | IDA:IEA | intermediate filament |
| GO:0005886 | IDA | plasma membrane |
| GO:0005925 | IDA | focal adhesion |
| GO:0006915 | TAS | apoptotic process |
| GO:0006921 | TAS | cellular component disassembly involved in execution phase of apoptosis |
| GO:0006928 | TAS | cellular component movement |
| GO:0008022 | IPI | protein C-terminus binding |
| GO:0010628 | IEA | positive regulation of gene expression |
| GO:0010977 | IEA | negative regulation of neuron projection development |
| GO:0014002 | IEA | astrocyte development |
| GO:0016032 | IEA | viral process |
| GO:0030049 | TAS | muscle filament sliding |
| GO:0031252 | IEA | cell leading edge |
| GO:0042802 | IPI | identical protein binding |
| GO:0042995 | IEA | cell projection |
| GO:0043005 | IEA | neuron projection |
| GO:0045103 | IEA | intermediate filament-based process |
| GO:0045109 | IEA | intermediate filament organization |
| GO:0045111 | IDA | intermediate filament cytoskeleton |
| GO:0060020 | IEA | Bergmann glial cell differentiation |
| GO:0060395 | IEA | SMAD protein signal transduction |
| GO:0070062 | IDA | extracellular vesicular exosome |
| GO:0070307 | IEA | lens fiber cell development |
| GO:0097110 | IPI | scaffold protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028062
|
Vim-001 | protein_coding | Mus_musculus | 0 | 2274 |
|
ENSMUST00000193675
|
Vim-006 | protein_coding | Mus_musculus | 0 | 1783 |
|
ENSMUST00000155605
|
Vim-002 | retained_intron | Mus_musculus | 0 | 990 |
|
ENSMUST00000148248
|
Vim-004 | retained_intron | Mus_musculus | 0 | 697 |
|
ENSMUST00000191615
|
Vim-005 | retained_intron | Mus_musculus | 0 | 640 |
|
ENSMUST00000141365
|
Vim-003 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000023797
|
Krt4-201 | protein_coding | Mus_musculus | 0.00000000000005 | 84 |
|
ENSMUST00000023786
|
Krt6b-201 | protein_coding | Mus_musculus | 0.000000000002 | 79 |
|
ENSMUST00000023788
|
Krt6a-201 | protein_coding | Mus_musculus | 0.000000000002 | 79 |
|
ENSMUST00000042957
|
Krt75-001 | protein_coding | Mus_musculus | 0.0000000001 | 73 |
|
ENSMUST00000100179
|
Krt76-001 | protein_coding | Mus_musculus | 0.000000001 | 69 |
|
ENSMUST00000023712
|
Krt2-001 | protein_coding | Mus_musculus | 0.000000005 | 68 |
|
ENSMUST00000023952
|
Krt8-201 | protein_coding | Mus_musculus | 0.000000005 | 68 |
|
ENSMUST00000088049
|
Krt86-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
|
ENSMUST00000081945
|
Krt83-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
|
ENSMUST00000061185
|
Krt81-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
|
ENSMUST00000023718
|
5430421N21Rik-001 | protein_coding | Mus_musculus | 0.00000006 | 64 |