ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000193675 Vim-006 ENSMUSG00000026728 10090 + 2:13574281-13582825 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000193675
Transcript ID C166 Tie2+ EC mES
ENSMUST00000193675 148.746±32.02 22.947±19.62 360.605±57.36

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 6.99949e-42 176
ENSDART00000121861 prph-201 protein_coding Danio_rerio 2e-37 161
ENSDART00000154314 prph-001 protein_coding Danio_rerio 2e-37 161
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0.000000000000003 88
ENST00000224237 VIM-001 protein_coding Homo_sapiens 0 1783
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 2e-22 111
ENST00000392131 KRT8P40-001 processed_pseudogene Homo_sapiens 0.0000000000002 81
ENST00000414254 KRT8P14-001 processed_pseudogene Homo_sapiens 2e-22 111
ENST00000421459 VIM-008 protein_coding Homo_sapiens 0 632
ENST00000432100 KRT8P30-001 processed_pseudogene Homo_sapiens 7e-18 95
ENST00000450021 KRT8P10-001 processed_pseudogene Homo_sapiens 2e-17 95
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 5e-17 94
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 2e-19 100
ENST00000469543 VIM-003 nonsense_mediated_decay Homo_sapiens 0 961
ENST00000478317 VIM-004 processed_transcript Homo_sapiens 0 715
ENST00000478746 VIM-005 processed_transcript Homo_sapiens 0 597
ENST00000483942 KRT8P35-001 processed_pseudogene Homo_sapiens 7e-21 106
ENST00000485947 VIM-007 processed_transcript Homo_sapiens 0 856
ENST00000487938 VIM-002 nonsense_mediated_decay Homo_sapiens 0 1784
ENST00000495528 VIM-009 processed_transcript Homo_sapiens 0 545
ENST00000497849 VIM-006 processed_transcript Homo_sapiens 0 418
ENST00000509735 KRT8P4-001 processed_pseudogene Homo_sapiens 9e-20 102
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 0.00000000002 75
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 3e-19 100
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 2e-17 95
ENST00000533985 KRT8P41-001 processed_pseudogene Homo_sapiens 6e-17 94
ENST00000544301 VIM-201 protein_coding Homo_sapiens 0 1783
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 3e-22 111
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 2e-22 111
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 9e-23 111
ENST00000549264 KRT90P-001 unprocessed_pseudogene Homo_sapiens 0.00000000000007 82
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 2e-22 111
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 2e-22 111
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 2e-22 111
ENST00000556193 KRT8P2-001 processed_pseudogene Homo_sapiens 1e-17 95
ENST00000577607 KRT8P34-001 processed_pseudogene Homo_sapiens 5e-16 90
ENST00000592443 KRT8P5-001 processed_pseudogene Homo_sapiens 7e-21 106
ENST00000604166 KRT8P49-001 processed_pseudogene Homo_sapiens 7e-16 90

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