ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566157 OGFOD1-001 ENSG00000087263 9606 + 16:56451490-56479100 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000566157
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000566157 4.996±0.93 7.101±0.00 3.632±1.73

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006449 IMP regulation of translational termination
GO:0008283 IMP cell proliferation
GO:0010494 IMP cytoplasmic stress granule
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0018126 IDA protein hydroxylation
GO:0019511 IDA peptidyl-proline hydroxylation
GO:0031418 IEA L-ascorbic acid binding
GO:0031543 IDA peptidyl-proline dioxygenase activity
GO:0031544 IDA peptidyl-proline 3-dioxygenase activity
GO:0034063 IMP stress granule assembly
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109556 Ogfod1-001 protein_coding Mus_musculus 0 1594
ENSMUST00000060632 Ogfod1-004 protein_coding Mus_musculus 0 1557
ENSMUST00000127634 Ogfod1-005 processed_transcript Mus_musculus 0 747
ENSMUST00000093301 Ogfod1-002 protein_coding Mus_musculus 0 726
ENSMUST00000172674 Ogfod1-007 processed_transcript Mus_musculus 0 686
ENSMUST00000145717 Ogfod1-006 retained_intron Mus_musculus 0 496
ENSMUST00000141636 Ogfod1-003 retained_intron Mus_musculus 0 316
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 6e-16 92
ENSMUST00000057256 6030458C11Rik-201 protein_coding Mus_musculus 0.0000000000001 84
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.00000000002 77
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00008 55

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