ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578112 SMARCE1-011 ENSG00000073584 9606 - 17:40627707-40647841 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000578112
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000578112 16.288±3.90 18.868±4.71 29.664±0.00 33.348±0.00 15.325±9.85

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103133 Smarce1-001 protein_coding Mus_musculus 0 1764
ENSMUST00000180067 Smarce1-ps1-201 processed_pseudogene Mus_musculus 0 1430
ENSMUST00000178171 Gm8494-001 processed_pseudogene Mus_musculus 0 1208
ENSDART00000121981 smarce1-001 protein_coding Danio_rerio 0 638
ENSMUST00000155062 Smarce1-005 processed_transcript Mus_musculus 0 610
ENSDART00000011319 smarce1-201 protein_coding Danio_rerio 0 593
ENSMUST00000156160 Smarce1-006 processed_transcript Mus_musculus 0 547
ENSMUST00000135040 Smarce1-003 processed_transcript Mus_musculus 0 331
ENSMUST00000128707 Smarce1-004 processed_transcript Mus_musculus 0 193
ENSMUST00000128215 Smarce1-002 processed_transcript Mus_musculus 3e-36 158

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