ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: protocadherin beta 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609684 PCDHB16-001 ENSG00000272674 9606 + 5:141181399-141186399 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000609684
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000609684 0.028±0.00 0.062±0.02 0.357±0.00 0.060±0.00 0.095±0.08

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053856 Pcdhb17-001 protein_coding Mus_musculus 0 1740
ENSMUST00000052387 Pcdhb14-001 protein_coding Mus_musculus 0 1002
ENSMUST00000056712 Pcdhb4-001 protein_coding Mus_musculus 0 979
ENSMUST00000053073 Pcdhb11-001 protein_coding Mus_musculus 0 953
ENSMUST00000056522 Pcdhb2-001 protein_coding Mus_musculus 0 924
ENSMUST00000051754 Pcdhb3-001 protein_coding Mus_musculus 0 859
ENSMUST00000050034 Pcdhb15-001 protein_coding Mus_musculus 0 789

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