ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056712 Pcdhb4-001 ENSMUSG00000045689 10090 + 18:37307455-37311172 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000056712
Transcript ID C166 Tie2+ EC mES
ENSMUST00000056712 0.061±0.01 0.754±0.40 0.025±0.02

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000194152 PCDHB4-001 protein_coding Homo_sapiens 0 1090
ENST00000194155 PCDHB2-001 protein_coding Homo_sapiens 0 955
ENST00000231134 PCDHB5-001 protein_coding Homo_sapiens 0 1746
ENST00000231136 PCDHB6-001 protein_coding Homo_sapiens 0 1037
ENST00000231137 PCDHB7-001 protein_coding Homo_sapiens 0 933
ENST00000231173 PCDHB15-001 protein_coding Homo_sapiens 0 1051
ENST00000239444 PCDHB8-001 protein_coding Homo_sapiens 0 918
ENST00000239449 PCDHB14-001 protein_coding Homo_sapiens 0 881
ENST00000239450 PCDHB12-001 protein_coding Homo_sapiens 0 905
ENST00000341948 PCDHB13-001 protein_coding Homo_sapiens 0 845
ENST00000354757 PCDHB11-001 protein_coding Homo_sapiens 0 894
ENST00000539533 PCDHB17-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1020
ENST00000543635 PCDHB3-201 protein_coding Homo_sapiens 0 1053
ENST00000609684 PCDHB16-001 protein_coding Homo_sapiens 0 979
ENST00000618012 PCDHGB9P-001 unprocessed_pseudogene Homo_sapiens 0.000000000002 79
ENST00000622947 PCDHB2-003 protein_coding Homo_sapiens 0 952
ENST00000622978 PCDHB12-003 protein_coding Homo_sapiens 0 905
ENST00000622991 PCDHB6-002 protein_coding Homo_sapiens 0 1037
ENST00000623466 PCDHB17-002 processed_transcript Homo_sapiens 0 1020
ENST00000623478 PCDHB4-002 processed_transcript Homo_sapiens 0 839
ENST00000623671 PCDHB15-002 protein_coding Homo_sapiens 2e-27 126
ENST00000623915 PCDHB5-002 protein_coding Homo_sapiens 0 787
ENST00000624887 PCDHB11-002 protein_coding Homo_sapiens 0 894
ENST00000624896 PCDHB14-003 protein_coding Homo_sapiens 0 881
ENST00000624949 PCDHB12-002 protein_coding Homo_sapiens 0 905

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