ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: TAR DNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621573 TARDBP-025 ENSG00000120948 9606 + 1:11022548-11024273 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000621573
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000621573 24.078±6.89 52.992±0.00 48.458±3.37

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147391 Tardbp-005 nonsense_mediated_decay Mus_musculus 0 1312
ENSMUST00000084125 Tardbp-001 protein_coding Mus_musculus 0 942
ENSMUST00000189041 Tardbp-026 processed_transcript Mus_musculus 0 649
ENSMUST00000140897 Tardbp-004 nonsense_mediated_decay Mus_musculus 0 597
ENSMUST00000045180 Tardbp-002 nonsense_mediated_decay Mus_musculus 0 593
ENSMUST00000188134 Tardbp-024 nonsense_mediated_decay Mus_musculus 0 593
ENSMUST00000191450 Tardbp-009 nonsense_mediated_decay Mus_musculus 0 590
ENSMUST00000190287 Tardbp-020 nonsense_mediated_decay Mus_musculus 0 499
ENSMUST00000191378 Tardbp-018 nonsense_mediated_decay Mus_musculus 0 497
ENSMUST00000190552 Tardbp-017 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000186317 Tardbp-027 processed_transcript Mus_musculus 0 401
ENSMUST00000105702 Tardbp-201 protein_coding Mus_musculus 0 372
ENSMUST00000172073 Tardbp-203 protein_coding Mus_musculus 0 372
ENSMUST00000165113 Tardbp-202 protein_coding Mus_musculus 0 372
ENSMUST00000190630 Tardbp-021 protein_coding Mus_musculus 0 372
ENSMUST00000186711 Tardbp-025 protein_coding Mus_musculus 0 372
ENSMUST00000187937 Tardbp-028 processed_transcript Mus_musculus 0 372
ENSMUST00000190696 Tardbp-011 nonsense_mediated_decay Mus_musculus 0 346
ENSMUST00000185824 Tardbp-016 protein_coding Mus_musculus 0 222
ENSMUST00000189048 Tardbp-012 protein_coding Mus_musculus 0 222
ENSMUST00000186729 Tardbp-023 nonsense_mediated_decay Mus_musculus 0 222
ENSMUST00000095719 Tardbp-007 protein_coding Mus_musculus 0 219
ENSMUST00000105699 Tardbp-006 protein_coding Mus_musculus 0 219
ENSMUST00000117876 Gm13886-001 processed_pseudogene Mus_musculus 8e-34 148

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