ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: ribosomal protein L13a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624069 RPL13A-013 ENSG00000142541 9606 + 19:49487603-49492308 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHHSECHUVECENST00000624069
Transcript ID BECs HHSEC HUVEC
ENST00000624069 546.432±0.00 361.389±0.00 486.182±439.10

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150350 Rpl13a-001 protein_coding Mus_musculus 0 750
ENSMUST00000124300 Rpl13a-011 protein_coding Mus_musculus 0 678
ENSMUST00000102669 Rpl13a-009 nonsense_mediated_decay Mus_musculus 0 647
ENSMUST00000117851 Gm11478-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000125074 Rpl13a-006 processed_transcript Mus_musculus 0 582
ENSMUST00000142239 Rpl13a-010 processed_transcript Mus_musculus 0 355
ENSMUST00000131697 Rpl13a-005 retained_intron Mus_musculus 0 307
ENSMUST00000141807 Rpl13a-002 processed_transcript Mus_musculus 0 305
ENSMUST00000138887 Rpl13a-007 retained_intron Mus_musculus 9e-29 132
ENSMUST00000152970 Rpl13a-003 retained_intron Mus_musculus 9e-24 115

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