ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: protocadherin beta 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113209 PCDHB5 9606 + 5:141135218-141138625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231134 PCDHB5-001 141135218-141138625 protein_coding
  ENST00000623915 PCDHB5-002 141135229-141137449 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHUVECENST00000231134
Transcript ID BECs HAoEC HUVEC
ENST00000231134 0.132±0.04 0.168±0.06 0.308±0.23

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00062S CIL_00062S_0004 CGP
CIL_00062S CIL_00062S_0005 CGP
CIL_00062S CIL_00062S_0003 CGP
CIL_00062S CIL_00062S_0006 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071891 pcdh2g6 protein_coding Danio_rerio
ENSDARG00000074738 pcdh2g9 protein_coding Danio_rerio
ENSDARG00000077343 CT573264.1 protein_coding Danio_rerio
ENSMUSG00000043458 Pcdhb12 protein_coding Mus_musculus
ENSMUSG00000045657 Pcdhb10 protein_coding Mus_musculus
ENSMUSG00000045689 Pcdhb4 protein_coding Mus_musculus
ENSMUSG00000045876 Pcdhb8 protein_coding Mus_musculus
ENSMUSG00000051486 Pcdhb11 protein_coding Mus_musculus
ENSMUSG00000051678 Pcdhb6 protein_coding Mus_musculus

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