ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024002 Brd4 10090 - 17:32196274-32284722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003726 Brd4-201 32196276-32284097 protein_coding
  ENSMUST00000114475 Brd4-202 32206679-32284123 protein_coding
  ENSMUST00000119123 Brd4-004 32196274-32284097 protein_coding
  ENSMUST00000120276 Brd4-005 32204910-32284109 protein_coding
  ENSMUST00000121285 Brd4-003 32196274-32284109 protein_coding
  ENSMUST00000125899 Brd4-002 32213645-32284677 nonsense_mediated_decay
  ENSMUST00000127893 Brd4-001 32213610-32284722 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000003726ENSMUST00000114475ENSMUST00000120276ENSMUST00000121285ENSMUST00000127893
Transcript ID C166 Tie2+ EC mES
ENSMUST00000003726 3.906±0.70 4.413±0.00 N/A
ENSMUST00000114475 N/A 6.110±0.00 N/A
ENSMUST00000120276 N/A 4.495±0.00 5.536±0.47
ENSMUST00000121285 16.395±0.81 11.663±2.88 11.778±2.85
ENSMUST00000127893 N/A 10.810±0.00 12.442±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004DW CIL_0004DW_0003 CGP
CIL_00043N CIL_00043N_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000083 IEA regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000790 IDA nuclear chromatin
GO:0000794 IDA condensed nuclear chromosome
GO:0001833 IMP inner cell mass cell proliferation
GO:0002039 IEA p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IPI protein phosphorylation
GO:0007059 IMP chromosome segregation
GO:0008024 IDA positive transcription elongation factor complex b
GO:0010971 IEA positive regulation of G2/M transition of mitotic cell cycle
GO:0032968 IEA positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043388 IDA positive regulation of DNA binding
GO:0043983 IMP histone H4-K12 acetylation
GO:0044154 IMP histone H3-K14 acetylation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0050727 IEA regulation of inflammatory response
GO:0070577 IEA lysine-acetylated histone binding
GO:1901407 IEA regulation of phosphorylation of RNA polymerase II C-terminal domain
GO:2000002 IEA negative regulation of DNA damage checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078904 brd4 protein_coding Danio_rerio
ENSG00000141867 BRD4 bromodomain containing 4 protein_coding Homo_sapiens

Loading