ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068882 Ssb 10090 + 2:69861562-69871846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090852 Ssb-001 69861562-69871786 protein_coding
  ENSMUST00000112260 Ssb-003 69861686-69867552 protein_coding
  ENSMUST00000132186 Ssb-002 69861623-69871510 nonsense_mediated_decay
  ENSMUST00000132603 Ssb-005 69868779-69871510 protein_coding
  ENSMUST00000156057 Ssb-004 69863291-69869150 processed_transcript
  ENSMUST00000166411 Ssb-201 69861562-69871846 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000090852ENSMUST00000112260ENSMUST00000132186ENSMUST00000132603
Transcript ID C166 Tie2+ EC mES
ENSMUST00000090852 53.319±19.23 28.275±19.81 25.204±4.48
ENSMUST00000112260 70.202±6.11 N/A N/A
ENSMUST00000132186 29.565±6.89 15.799±5.65 12.579±3.84
ENSMUST00000132603 51.319±9.57 29.286±0.00 17.272±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007VY CIL_0007VY_0002 VISTA
CIL_0004SC CIL_0004SC_0002 CGP
CIL_0004SJ CIL_0004SJ_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006396 IEA RNA processing
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029252 ssb protein_coding Danio_rerio
ENSG00000138385 SSB Sjogren syndrome antigen B (autoantigen La) protein_coding Homo_sapiens

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