ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112260 Ssb-003 ENSMUSG00000068882 10090 + 2:69861686-69867552 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166ENSMUST00000112260
Transcript ID C166
ENSMUST00000112260 70.202±6.11

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0005634 IDA nucleus
GO:0006396 IEA RNA processing
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260956 SSB-001 protein_coding Homo_sapiens 0 704
ENST00000409333 SSB-003 protein_coding Homo_sapiens 0 697
ENST00000413002 SSB-006 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000414531 RP11-382H24.2-001 processed_pseudogene Homo_sapiens 0 483
ENST00000417292 SSB-005 protein_coding Homo_sapiens 0 547
ENST00000420252 AC013470.6-001 processed_pseudogene Homo_sapiens 0 619
ENST00000422006 SSB-004 protein_coding Homo_sapiens 0 701
ENST00000438469 RP11-325P15.2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000455793 RP11-3D23.1-001 processed_pseudogene Homo_sapiens 0 405
ENST00000461708 SSB-007 retained_intron Homo_sapiens 0 479
ENST00000468600 SSB-008 retained_intron Homo_sapiens 0 248
ENST00000468627 RP11-12N13.1-001 processed_pseudogene Homo_sapiens 0 274

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