ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132186 Ssb-002 ENSMUSG00000068882 10090 + 2:69861623-69871510 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000132186
Transcript ID C166 Tie2+ EC mES
ENSMUST00000132186 29.565±6.89 15.799±5.65 12.579±3.84

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0005634 IDA nucleus
GO:0006396 IEA RNA processing
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260956 SSB-001 protein_coding Homo_sapiens 0 606
ENST00000409333 SSB-003 protein_coding Homo_sapiens 0 599
ENST00000410097 METTL5-004 protein_coding Homo_sapiens 0 206
ENST00000413002 SSB-006 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000414531 RP11-382H24.2-001 processed_pseudogene Homo_sapiens 0 390
ENST00000417292 SSB-005 protein_coding Homo_sapiens 0 497
ENST00000420252 AC013470.6-001 processed_pseudogene Homo_sapiens 0 514
ENST00000422006 SSB-004 protein_coding Homo_sapiens 0 603
ENST00000438469 RP11-325P15.2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000455793 RP11-3D23.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000461708 SSB-007 retained_intron Homo_sapiens 0 479
ENST00000468600 SSB-008 retained_intron Homo_sapiens 0 248
ENST00000468627 RP11-12N13.1-001 processed_pseudogene Homo_sapiens 0 274
ENST00000470621 SSB-013 retained_intron Homo_sapiens 0 278
ENST00000474273 SSB-009 retained_intron Homo_sapiens 0 248
ENST00000490914 SSB-011 retained_intron Homo_sapiens 0 387
ENST00000494051 SSB-012 retained_intron Homo_sapiens 0 206

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