ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015892 Prpf3-001 ENSMUSG00000015748 10090 - 3:95830124-95855885 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000015892
Transcript ID C166 Tie2+ EC mES
ENSMUST00000015892 6.655±1.51 3.489±1.52 1.372±0.27

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 ISS spliceosomal tri-snRNP complex assembly
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0015030 IEA Cajal body
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0046540 IEA U4/U6 x U5 tri-snRNP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324862 PRPF3-001 protein_coding Homo_sapiens 0 3147
ENST00000467329 PRPF3-007 processed_transcript Homo_sapiens 0 1681
ENST00000470824 PRPF3-005 processed_transcript Homo_sapiens 0 440
ENST00000476970 PRPF3-004 processed_transcript Homo_sapiens 0 198
ENST00000496202 PRPF3-002 processed_transcript Homo_sapiens 0 715
ENST00000519029 RP11-409C19.2-001 processed_pseudogene Homo_sapiens 0 1797

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