ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: chromobox homolog 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396386 CBX3-002 ENSG00000122565 9606 + 7:26201693-26213351 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000396386
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000396386 58.782±16.59 51.280±10.12 145.153±0.00 105.341±44.79

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000779 ISS condensed chromosome, centromeric region
GO:0000785 IDA chromatin
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005635 ISS nuclear envelope
GO:0005637 NAS nuclear inner membrane
GO:0005719 IDA nuclear euchromatin
GO:0005720 IDA nuclear heterochromatin
GO:0005819 IDA spindle
GO:0006338 NAS chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0019899 IPI enzyme binding
GO:0019904 IPI protein domain specific binding
GO:0031618 ISS nuclear pericentric heterochromatin
GO:0042802 IPI identical protein binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0048511 IEA rhythmic process
GO:1990226 IPI histone methyltransferase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 0 968
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 0 931
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 0 926
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000091531 Gm5196-201 processed_pseudogene Mus_musculus 0 654
ENSMUST00000091539 Gm6917-201 processed_pseudogene Mus_musculus 0 638
ENSMUST00000091545 Gm6901-201 processed_pseudogene Mus_musculus 0 634
ENSMUST00000099421 Gm5792-201 processed_pseudogene Mus_musculus 0 628
ENSMUST00000185597 Gm8296-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000118595 Cbx3-ps3-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000141711 Cbx3-007 protein_coding Mus_musculus 0 494
ENSMUST00000190083 Gm3489-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 0 381
ENSMUST00000114445 Cbx3-004 protein_coding Mus_musculus 0 270

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