ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035237 Usp4-001 ENSMUSG00000032612 10090 + 9:108347853-108392545 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000035237
Transcript ID C166 Tie2+ EC mES
ENSMUST00000035237 19.271±1.32 15.994±0.52 15.119±3.42

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 ISS spliceosomal tri-snRNP complex assembly
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 ISS protein deubiquitination
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031647 ISS regulation of protein stability
GO:0031685 IEA adenosine receptor binding
GO:0034394 ISS protein localization to cell surface
GO:0042802 IEA identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265560 USP4-002 protein_coding Homo_sapiens 0 3500
ENST00000351842 USP4-001 protein_coding Homo_sapiens 0 2372
ENST00000415188 USP4-011 protein_coding Homo_sapiens 0 924
ENST00000416417 USP4-005 protein_coding Homo_sapiens 0 926
ENST00000431357 USP4-004 protein_coding Homo_sapiens 0 1550
ENST00000461553 USP4-009 processed_transcript Homo_sapiens 0 518
ENST00000464168 USP4-013 processed_transcript Homo_sapiens 0 630
ENST00000485450 USP4-003 retained_intron Homo_sapiens 0 2525
ENST00000486549 USP4-010 processed_transcript Homo_sapiens 0 392
ENST00000488520 USP4-008 processed_transcript Homo_sapiens 0 896
ENST00000491791 USP4-014 processed_transcript Homo_sapiens 0 806

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