Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_transcripts' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_transcripts' to File cache [CORE/Cake/Cache/Cache.php, line 323]
ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043368 Zcchc11-201 ENSMUSG00000034610 10090 + 4:108459426-108559415 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000043368
Transcript ID C166 Tie2+ EC mES
ENSMUST00000043368 5.234±1.60 4.152±2.07 8.002±4.15

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IDA cytokine production
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA:ISS cytoplasm
GO:0008270 IEA zinc ion binding
GO:0010586 IMP miRNA metabolic process
GO:0010587 ISS miRNA catabolic process
GO:0019827 ISS stem cell maintenance
GO:0031054 ISS pre-miRNA processing
GO:0031123 IDA RNA 3'-end processing
GO:0031664 IDA regulation of lipopolysaccharide-mediated signaling pathway
GO:0032088 IDA negative regulation of NF-kappaB transcription factor activity
GO:0032755 IMP positive regulation of interleukin-6 production
GO:0044822 IEA poly(A) RNA binding
GO:0050265 IDA RNA uridylyltransferase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070102 IMP interleukin-6-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257177 ZCCHC11-005 protein_coding Homo_sapiens 0 4490
ENST00000355809 ZCCHC11-003 protein_coding Homo_sapiens 0 558
ENST00000371541 ZCCHC11-002 processed_transcript Homo_sapiens 0 3219
ENST00000371544 ZCCHC11-001 protein_coding Homo_sapiens 0 4503
ENST00000466440 ZCCHC11-006 retained_intron Homo_sapiens 0 804
ENST00000470212 ZCCHC11-008 retained_intron Homo_sapiens 0 446
ENST00000470626 ZCCHC11-013 protein_coding Homo_sapiens 0 335
ENST00000471623 ZCCHC11-015 protein_coding Homo_sapiens 0 422
ENST00000473856 ZCCHC11-014 nonsense_mediated_decay Homo_sapiens 0 1166
ENST00000474453 ZCCHC11-016 protein_coding Homo_sapiens 0 782
ENST00000481133 ZCCHC11-011 retained_intron Homo_sapiens 0 305
ENST00000481528 ZCCHC11-009 retained_intron Homo_sapiens 0 296
ENST00000484723 ZCCHC11-017 protein_coding Homo_sapiens 0 3413
ENST00000494469 ZCCHC11-007 protein_coding Homo_sapiens 0 815
ENST00000497120 ZCCHC11-010 retained_intron Homo_sapiens 0 876
ENST00000524582 ZCCHC11-018 protein_coding Homo_sapiens 0 446
ENST00000527941 ZCCHC11-020 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000528457 ZCCHC11-021 protein_coding Homo_sapiens 0 418
ENST00000528642 ZCCHC11-012 protein_coding Homo_sapiens 0 2490
ENST00000531722 ZCCHC11-019 protein_coding Homo_sapiens 0 747

Loading

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]