ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107934 Shank1-002 ENSMUSG00000038738 10090 + 7:44312707-44357337 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000107934
Transcript ID C166 Tie2+ EC
ENSMUST00000107934 0.024±0.00 0.003±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032232 IDA negative regulation of actin filament bundle assembly
GO:0045211 IDA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293441 SHANK1-001 protein_coding Homo_sapiens 0 6656
ENST00000359082 SHANK1-008 protein_coding Homo_sapiens 0 6782
ENST00000391813 SHANK1-003 protein_coding Homo_sapiens 0 4377
ENST00000391814 SHANK1-002 protein_coding Homo_sapiens 0 6811
ENST00000461154 SHANK1-005 retained_intron Homo_sapiens 8.99998e-41 171
ENST00000468654 SHANK1-006 nonsense_mediated_decay Homo_sapiens 0 547

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