ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: Sjogren syndrome antigen B (autoantigen La)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260956 SSB-001 ENSG00000138385 9606 + 2:169798812-169812064 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000260956
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000260956 28.915±7.09 29.947±12.20 14.793±0.00 79.555±0.00 33.229±35.92

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 TAS tRNA binding
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003729 TAS mRNA binding
GO:0005515 IPI protein binding
GO:0006396 IEA RNA processing
GO:0006400 TAS tRNA modification
GO:0008334 TAS histone mRNA metabolic process
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090852 Ssb-001 protein_coding Mus_musculus 0 1184
ENSMUST00000166411 Ssb-201 protein_coding Mus_musculus 0 1182
ENSMUST00000112260 Ssb-003 protein_coding Mus_musculus 0 704
ENSMUST00000132186 Ssb-002 nonsense_mediated_decay Mus_musculus 0 606
ENSMUST00000156057 Ssb-004 processed_transcript Mus_musculus 0 536
ENSMUST00000132603 Ssb-005 protein_coding Mus_musculus 0 479

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