ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114991 Sema4c-001 ENSMUSG00000026121 10090 - 1:36548642-36558349 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000114991
Transcript ID C166 Tie2+ EC
ENSMUST00000114991 4.722±1.05 9.016±0.89

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0014069 IDA postsynaptic density
GO:0016021 IEA integral component of membrane
GO:0021535 IMP cell migration in hindbrain
GO:0021549 IMP cerebellum development
GO:0030054 IEA cell junction
GO:0030672 IDA synaptic vesicle membrane
GO:0032874 ISS positive regulation of stress-activated MAPK cascade
GO:0042692 IMP muscle cell differentiation
GO:0045211 IEA postsynaptic membrane
GO:0071526 IMP semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305476 SEMA4C-001 protein_coding Homo_sapiens 0 3367
ENST00000442264 SEMA4C-006 protein_coding Homo_sapiens 0 719
ENST00000449330 SEMA4C-005 protein_coding Homo_sapiens 0 538
ENST00000467747 SEMA4C-003 retained_intron Homo_sapiens 0 1639
ENST00000474420 SEMA4C-004 retained_intron Homo_sapiens 0 1507
ENST00000482925 SEMA4C-002 retained_intron Homo_sapiens 0 3109

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