ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305476 SEMA4C-001 ENSG00000168758 9606 - 2:96859716-96869971 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000305476
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000305476 1.017±0.56 1.744±0.91 25.004±0.00 2.619±0.00 4.000±2.76

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 ISS neural tube closure
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0014069 ISS postsynaptic density
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0021535 ISS cell migration in hindbrain
GO:0021549 IEA cerebellum development
GO:0030054 IEA cell junction
GO:0030672 ISS synaptic vesicle membrane
GO:0032874 IDA positive regulation of stress-activated MAPK cascade
GO:0042692 IDA muscle cell differentiation
GO:0045211 IEA postsynaptic membrane
GO:0071526 ISS semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114991 Sema4c-001 protein_coding Mus_musculus 0 3367
ENSMUST00000191677 Sema4c-003 protein_coding Mus_musculus 0 3354
ENSMUST00000195620 Sema4c-002 protein_coding Mus_musculus 0 3297
ENSMUST00000191642 Sema4c-006 protein_coding Mus_musculus 0 3297
ENSMUST00000195339 Sema4c-004 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000193382 Sema4c-005 protein_coding Mus_musculus 1.96182e-44 185

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