ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162945 Spata13-002 ENSMUSG00000021990 10090 + 14:60732906-60764549 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000162945
Transcript ID C166 Tie2+ EC mES
ENSMUST00000162945 16.239±3.20 10.186±1.26 4.669±2.17

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146113 arhgef9b-001 protein_coding Danio_rerio 0 315
ENST00000326016 ARHGEF4-001 protein_coding Homo_sapiens 0 505
ENST00000343003 SPATA13-201 protein_coding Homo_sapiens 0 1890
ENST00000355771 ARHGEF4-009 protein_coding Homo_sapiens 0 505
ENST00000382095 SPATA13-001 protein_coding Homo_sapiens 0 1890
ENST00000382108 SPATA13-202 protein_coding Homo_sapiens 0 1890
ENST00000382141 RP11-307N16.6-001 nonsense_mediated_decay Homo_sapiens 0 1703
ENST00000392953 ARHGEF4-201 protein_coding Homo_sapiens 0 505
ENST00000399949 SPATA13-006 protein_coding Homo_sapiens 0 1986
ENST00000409126 SPATA13-011 protein_coding Homo_sapiens 0 1363
ENST00000409303 ARHGEF4-005 protein_coding Homo_sapiens 0 202
ENST00000424834 SPATA13-008 protein_coding Homo_sapiens 0 1890
ENST00000434675 SPATA13-010 protein_coding Homo_sapiens 0 1363
ENST00000439368 ARHGEF4-010 processed_transcript Homo_sapiens 0 202
ENST00000496764 ARHGEF4-007 processed_transcript Homo_sapiens 2e-38 163
ENST00000525839 ARHGEF4-002 protein_coding Homo_sapiens 0 505
ENST00000528247 ARHGEF4-011 processed_transcript Homo_sapiens 0 189
ENST00000611048 ARHGEF4-203 protein_coding Homo_sapiens 0 202

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