| Transcript ID | BECs | HAoEC | HHSEC | HMVEC-D | HUVEC |
|---|---|---|---|---|---|
| ENST00000215793 | 3.748±0.00 | 33.041±11.69 | 4.021±0.00 | 15.344±0.00 | 13.135±8.75 |
ANGIOGENES: A knowledge database for angiogenesis
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Transcript Info |
||||||
| Description: | splicing factor 3a, subunit 1, 120kDa | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000215793  |
SF3A1-001 |
ENSG00000099995 |
9606 | - |
22:30331988-30356947  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000389 | TAS | mRNA 3'-splice site recognition |
| GO:0000398 | IDA | mRNA splicing, via spliceosome |
| GO:0003723 | IDA:IEA | RNA binding |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005654 | TAS | nucleoplasm |
| GO:0005681 | IDA | spliceosomal complex |
| GO:0005684 | IDA | U2-type spliceosomal complex |
| GO:0006396 | IEA | RNA processing |
| GO:0006397 | IMP | mRNA processing |
| GO:0008380 | TAS | RNA splicing |
| GO:0010467 | TAS | gene expression |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0071013 | IDA | catalytic step 2 spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000002198
|
Sf3a1-003 | protein_coding | Mus_musculus | 0 | 3208 |
|
ENSMUST00000132666
|
Sf3a1-004 | retained_intron | Mus_musculus | 0 | 1035 |
|
ENSMUST00000133095
|
Sf3a1-001 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSMUST00000129583
|
Sf3a1-002 | processed_transcript | Mus_musculus | 0 | 261 |
