ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: protocadherin beta 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354757 PCDHB11-001 ENSG00000197479 9606 + 5:141199582-141203779 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000354757
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000354757 0.032±0.00 0.102±0.04 0.076±0.00 0.149±0.10

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005887 TAS integral component of plasma membrane
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052387 Pcdhb14-001 protein_coding Mus_musculus 0 924
ENSMUST00000053073 Pcdhb11-001 protein_coding Mus_musculus 0 902
ENSMUST00000056712 Pcdhb4-001 protein_coding Mus_musculus 0 894
ENSMUST00000056522 Pcdhb2-001 protein_coding Mus_musculus 0 887
ENSMUST00000053856 Pcdhb17-001 protein_coding Mus_musculus 0 865
ENSMUST00000051754 Pcdhb3-001 protein_coding Mus_musculus 0 863
ENSMUST00000050034 Pcdhb15-001 protein_coding Mus_musculus 0 822
ENSMUST00000137650 Trpm1-014 protein_coding Mus_musculus 0.00002 57

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