ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: high mobility group nucleosome binding domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380749 HMGN1-001 ENSG00000205581 9606 - 21:39342315-39349200 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000380749
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000380749 41.521±28.43 41.623±17.46 23.687±0.00 53.006±0.00 82.417±45.36

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000720 IEA pyrimidine dimer repair by nucleotide-excision repair
GO:0000785 IEA chromatin
GO:0003677 TAS DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006283 IEA transcription-coupled nucleotide-excision repair
GO:0006325 IEA chromatin organization
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0010224 IEA response to UV-B
GO:0010225 IEA response to UV-C
GO:0031492 IEA nucleosomal DNA binding
GO:0032786 TAS positive regulation of DNA-templated transcription, elongation
GO:0040034 IEA regulation of development, heterochronic
GO:0048597 IEA post-embryonic camera-type eye morphogenesis
GO:0050678 IEA regulation of epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050884 Hmgn1-001 protein_coding Mus_musculus 0 590
ENSMUST00000145713 Hmgn1-003 retained_intron Mus_musculus 0 281

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