ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: RAB guanine nucleotide exchange factor (GEF) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450873 RABGEF1-002 ENSG00000154710 9606 + 7:66740733-66809817 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000450873
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000450873 2.628±0.88 4.122±0.00 2.486±0.00 3.543±0.83

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005769 IMP early endosome
GO:0006612 IMP protein targeting to membrane
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0017137 IPI Rab GTPase binding
GO:0032851 IDA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026390 Rabgef1-002 protein_coding Mus_musculus 0 1888
ENSMUST00000119797 Rabgef1-001 protein_coding Mus_musculus 0 1884
ENSMUST00000148264 Rabgef1-003 protein_coding Mus_musculus 0 944
ENSMUST00000119027 Rabgef1-004 protein_coding Mus_musculus 0 841
ENSMUST00000147493 Rabgef1-007 retained_intron Mus_musculus 0 501
ENSMUST00000143727 Rabgef1-005 retained_intron Mus_musculus 0 444

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