ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: RAB guanine nucleotide exchange factor (GEF) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607882 RABGEF1-007 ENSG00000154710 9606 + 7:66682164-66809662 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000607882
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000607882 5.426±2.46 2.224±0.43 2.286±0.00 3.985±1.16

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026390 Rabgef1-002 protein_coding Mus_musculus 0 1149
ENSMUST00000119797 Rabgef1-001 protein_coding Mus_musculus 0 1149
ENSMUST00000147493 Rabgef1-007 retained_intron Mus_musculus 0 501
ENSMUST00000143727 Rabgef1-005 retained_intron Mus_musculus 0 446
ENSMUST00000119027 Rabgef1-004 protein_coding Mus_musculus 0 444
ENSMUST00000148264 Rabgef1-003 protein_coding Mus_musculus 0 440

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