ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tripartite motif containing 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132481 TRIM47 9606 - 17:75874161-75878575 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254816 TRIM47-001 75874161-75878575 protein_coding
  ENST00000585333 TRIM47-007 75874164-75874892 protein_coding
  ENST00000586495 TRIM47-004 75876435-75877264 protein_coding
  ENST00000587339 TRIM47-002 75874164-75878196 protein_coding
  ENST00000587774 TRIM47-003 75876434-75878213 retained_intron
  ENST00000592942 TRIM47-006 75874523-75875591 retained_intron
  ENST00000593089 TRIM47-005 75875841-75876394 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000254816ENST00000585333ENST00000587339ENST00000592942ENST00000593089
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000254816 N/A 0.912±0.34 N/A 5.201±0.00 5.159±3.16
ENST00000585333 183.374±49.54 13.559±8.50 134.406±0.00 28.008±0.00 15.076±6.14
ENST00000587339 14.691±0.00 3.721±2.10 23.226±0.00 9.810±0.00 13.377±13.73
ENST00000592942 73.744±18.71 8.615±4.05 53.016±0.00 N/A 9.053±4.23
ENST00000593089 N/A 9.113±2.89 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008WF CIL_0008WF_0001 VISTA
CIL_00078U CIL_00078U_0001 CGP
CIL_00078V CIL_00078V_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003909 ftr01 protein_coding Danio_rerio
ENSDARG00000005327 ftr66 protein_coding Danio_rerio
ENSDARG00000008396 ftr24 protein_coding Danio_rerio
ENSDARG00000009161 ftr55 protein_coding Danio_rerio
ENSDARG00000018506 ftr03 protein_coding Danio_rerio
ENSDARG00000020863 trim25l protein_coding Danio_rerio
ENSDARG00000025403 ftr83 protein_coding Danio_rerio
ENSDARG00000026704 ftr72 protein_coding Danio_rerio
ENSDARG00000029105 ftr51 protein_coding Danio_rerio
ENSDARG00000030954 ftr56 protein_coding Danio_rerio
ENSDARG00000032043 ftr16 protein_coding Danio_rerio
ENSDARG00000034707 si:ch211-121a2.3 protein_coding Danio_rerio
ENSDARG00000035339 si:dkeyp-110c7.2 protein_coding Danio_rerio
ENSDARG00000037190 CABZ01062780.1 protein_coding Danio_rerio
ENSDARG00000038646 ftr11 protein_coding Danio_rerio
ENSDARG00000038747 FQ377660.1 protein_coding Danio_rerio
ENSDARG00000039852 si:ch1073-460d17.3 protein_coding Danio_rerio
ENSDARG00000040536 si:ch211-276c2.5 protein_coding Danio_rerio
ENSDARG00000041220 ftr53 protein_coding Danio_rerio
ENSDARG00000043850 ftr54 protein_coding Danio_rerio
ENSDARG00000052971 ftr19 protein_coding Danio_rerio
ENSDARG00000053293 ftr14 protein_coding Danio_rerio
ENSDARG00000053366 ftr12 protein_coding Danio_rerio
ENSDARG00000053450 ftr06 protein_coding Danio_rerio
ENSDARG00000054153 ftr50 protein_coding Danio_rerio
ENSDARG00000055436 si:dkey-177p2.16 protein_coding Danio_rerio
ENSDARG00000055476 CR352329.1 protein_coding Danio_rerio
ENSDARG00000055520 ftr61 protein_coding Danio_rerio
ENSDARG00000055647 ftr82 protein_coding Danio_rerio
ENSDARG00000067661 CU855931.1 protein_coding Danio_rerio
ENSDARG00000067872 si:ch73-19f24.2 unprocessed_pseudogene Danio_rerio
ENSDARG00000067985 ftr23 protein_coding Danio_rerio
ENSDARG00000069514 CABZ01034854.1 protein_coding Danio_rerio
ENSDARG00000071238 ftr58 protein_coding Danio_rerio
ENSDARG00000073735 si:ch211-150h8.3 protein_coding Danio_rerio
ENSDARG00000074118 ftr15 protein_coding Danio_rerio
ENSDARG00000074360 ftr57 protein_coding Danio_rerio
ENSDARG00000075355 ftr35 protein_coding Danio_rerio
ENSDARG00000076093 ftr76 protein_coding Danio_rerio
ENSDARG00000076106 ftr43 protein_coding Danio_rerio
ENSDARG00000076839 zgc:153258 protein_coding Danio_rerio
ENSDARG00000076969 ftr22 protein_coding Danio_rerio
ENSDARG00000077412 ftr08 protein_coding Danio_rerio
ENSDARG00000078065 si:ch73-243c6.2 protein_coding Danio_rerio
ENSDARG00000078254 ftr14l protein_coding Danio_rerio
ENSDARG00000078446 ftr07 protein_coding Danio_rerio
ENSDARG00000079412 ftr02 protein_coding Danio_rerio
ENSDARG00000079537 ftr13 protein_coding Danio_rerio
ENSDARG00000079614 ftr38 protein_coding Danio_rerio
ENSDARG00000087057 ftr34 protein_coding Danio_rerio
ENSDARG00000089388 ftr37 protein_coding Danio_rerio
ENSDARG00000090431 ftr04 protein_coding Danio_rerio
ENSDARG00000092023 ftr10 protein_coding Danio_rerio
ENSDARG00000092745 ftr29 protein_coding Danio_rerio
ENSDARG00000092961 ftr26 protein_coding Danio_rerio
ENSDARG00000093203 ftr32 protein_coding Danio_rerio
ENSDARG00000093263 FO818740.1 protein_coding Danio_rerio
ENSDARG00000093651 ftr23 protein_coding Danio_rerio
ENSDARG00000093932 ftr04 protein_coding Danio_rerio
ENSDARG00000093972 ftr79 protein_coding Danio_rerio
ENSDARG00000094131 ftr27 protein_coding Danio_rerio
ENSDARG00000095032 ftr33 protein_coding Danio_rerio
ENSDARG00000095083 ftr05 protein_coding Danio_rerio
ENSDARG00000095298 ftr73 protein_coding Danio_rerio
ENSDARG00000095345 ftr09 protein_coding Danio_rerio
ENSDARG00000095448 ftr30 protein_coding Danio_rerio
ENSDARG00000095678 ftr36 protein_coding Danio_rerio
ENSDARG00000095825 si:ch73-67c22.3 protein_coding Danio_rerio
ENSDARG00000095864 ftr59 protein_coding Danio_rerio
ENSDARG00000097373 si:dkey-101o7.4 protein_coding Danio_rerio
ENSDARG00000097679 si:dkey-101o7.6 protein_coding Danio_rerio
ENSDARG00000098004 si:dkey-101o7.7 protein_coding Danio_rerio
ENSMUSG00000020773 Trim47 protein_coding Mus_musculus

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