ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057343 Ptbp1-008 ENSMUSG00000006498 10090 + 10:79854652-79863424 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECENSMUST00000057343
Transcript ID Tie2+ EC
ENSMUST00000057343 60.123±2.53

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0048025 IMP negative regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017668 ptbp1a-001 protein_coding Danio_rerio 0 399
ENST00000349038 PTBP1-003 protein_coding Homo_sapiens 0 1157
ENST00000350092 PTBP1-019 protein_coding Homo_sapiens 0 985
ENST00000356948 PTBP1-001 protein_coding Homo_sapiens 0 1074
ENST00000394601 PTBP1-002 protein_coding Homo_sapiens 0 1055
ENST00000554374 PTBP1P-001 processed_pseudogene Homo_sapiens 0 863
ENST00000585856 PTBP1-007 retained_intron Homo_sapiens 0 760
ENST00000585932 PTBP1-014 nonsense_mediated_decay Homo_sapiens 0 841
ENST00000585956 PTBP1-016 protein_coding Homo_sapiens 0 459
ENST00000586481 PTBP1-013 protein_coding Homo_sapiens 0 505
ENST00000586944 PTBP1-004 retained_intron Homo_sapiens 0 1074
ENST00000587136 PTBP1-008 retained_intron Homo_sapiens 0 294
ENST00000587191 PTBP1-017 protein_coding Homo_sapiens 0 399
ENST00000589575 PTBP1-006 protein_coding Homo_sapiens 0 791
ENST00000590887 PTBP1-005 retained_intron Homo_sapiens 0 244
ENST00000592113 PTBP1-018 retained_intron Homo_sapiens 0 551
ENST00000592804 PTBP1-010 retained_intron Homo_sapiens 0 244
ENST00000621737 PTBP1-015 nonsense_mediated_decay Homo_sapiens 0 1271

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